CompNovoIdentification

class pyopenms.CompNovoIdentification

Bases: object

Cython implementation of _CompNovoIdentification

Original C++ documentation is available here

– Inherits from [‘DefaultParamHandler’]

__init__()

Overload:

__init__(self) → None

Overload:

__init__(self, in_0: CompNovoIdentification) → None

Methods

__init__	Overload:
getDefaults(self)	Returns the default parameters
getIdentification(self, id, cid_spec, etd_spec)	Performs and returns de novo identifications
getIdentifications(self, ids, in_1)	Performs and returns de novo identifications
getName(self)	Returns the name
getParameters(self)	Returns the parameters
getSubsections(self)
setName(self, in_0)	Sets the name
setParameters(self, param)	Sets the parameters

getDefaults(self) → Param

Returns the default parameters

getIdentification(self, id: PeptideIdentification, cid_spec: MSSpectrum, etd_spec: MSSpectrum) → None

Performs and returns de novo identifications

getIdentifications(self, ids: List[PeptideIdentification], in_1: MSExperiment) → None

Performs and returns de novo identifications

getName(self) → bytes | str | String

Returns the name

getParameters(self) → Param

Returns the parameters

getSubsections(self) → List[bytes]

setName(self, in_0: bytes | str | String) → None

Sets the name

setParameters(self, param: Param) → None

Sets the parameters