LibSVMEncoder

class pyopenms.LibSVMEncoder

Bases: object

Cython implementation of _LibSVMEncoder

Original C++ documentation is available here

Serves for encoding sequences into feature vectors

The class can be used to construct composition vectors for sequences. Additionally the vectors can be encoded into the libsvm format

__init__()

Overload:

__init__(self) → None

Overload:

__init__(self, in_0: LibSVMEncoder) → None

Methods

__init__	Overload:
predictPeptideRT	__static_LibSVMEncoder_predictPeptideRT(sequences: List[bytes] , svm: SVMWrapper , allowed_characters: Union[bytes, str, String] , maximum_sequence_length: int ) -> List[float]

predictPeptideRT()

__static_LibSVMEncoder_predictPeptideRT(sequences: List[bytes] , svm: SVMWrapper , allowed_characters: Union[bytes, str, String] , maximum_sequence_length: int ) -> List[float]