SiriusMzTabWriter#
- class pyopenms.SiriusMzTabWriter#
Bases:
object
Cython implementation of _SiriusMzTabWriter
Original C++ documentation is available here
- __init__()#
Overload:
- __init__(self) None
Overload:
- __init__(self, in_0: SiriusMzTabWriter) None
Methods
Overload:
__static_SiriusMzTabWriter_extractFeatureId(path: Union[bytes, str, String] ) -> Union[bytes, str, String]
__static_SiriusMzTabWriter_extractScanIndex(path: Union[bytes, str, String] ) -> int
__static_SiriusMzTabWriter_extractScanNumber(path: Union[bytes, str, String] ) -> int
__static_SiriusMzTabWriter_extractSpectrumMSInfo(single_sirius_path: Union[bytes, str, String] ) -> SiriusMzTabWriter_SiriusSpectrumMSInfo
__static_SiriusMzTabWriter_extract_columnname_to_columnindex(csvfile: CsvFile ) -> Dict[bytes, int]
__static_SiriusMzTabWriter_read(sirius_output_paths: List[bytes] , original_input_mzml: Union[bytes, str, String] , top_n_hits: int , result: MzTab ) -> None
- extractFeatureId()#
__static_SiriusMzTabWriter_extractFeatureId(path: Union[bytes, str, String] ) -> Union[bytes, str, String]
- extractScanIndex()#
__static_SiriusMzTabWriter_extractScanIndex(path: Union[bytes, str, String] ) -> int
- extractScanNumber()#
__static_SiriusMzTabWriter_extractScanNumber(path: Union[bytes, str, String] ) -> int
- extractSpectrumMSInfo()#
__static_SiriusMzTabWriter_extractSpectrumMSInfo(single_sirius_path: Union[bytes, str, String] ) -> SiriusMzTabWriter_SiriusSpectrumMSInfo
- extract_columnname_to_columnindex()#
__static_SiriusMzTabWriter_extract_columnname_to_columnindex(csvfile: CsvFile ) -> Dict[bytes, int]
- read()#
__static_SiriusMzTabWriter_read(sirius_output_paths: List[bytes] , original_input_mzml: Union[bytes, str, String] , top_n_hits: int , result: MzTab ) -> None