pyopenms.plotting

Plot MSSpectrum & MSChromatogram data

The MSSpectrum plotting function are adapted from: Wout Bittremieux. “spectrum_utils: A Python package for mass spectrometry data processing and visualization.” Plot a single spectrum with plot_spectrum or two with mirror_plot_spectrum, using matplotlib.

Functions

mirror_plot_spectrum(spec_top, spec_bottom)	Mirror plot two MS/MS spectra.
plot_chromatogram(c)	Plot chromatogram peaks.
plot_spectrum(spectrum[, color_ions, ...])	Plot an MS/MS spectrum.