MRMTransitionGroupPicker

class pyopenms.MRMTransitionGroupPicker

Bases: object

Cython implementation of _MRMTransitionGroupPicker

Original C++ documentation is available here

– Inherits from [‘DefaultParamHandler’]

__init__()

Overload:

__init__(self) → None

Overload:

__init__(self, in_0: MRMTransitionGroupPicker) → None

Methods

__init__	Overload:
createMRMFeature(self, transition_group, ...)
findLargestPeak(self, picked_chroms, ...)
findWidestPeakIndices(self, picked_chroms, ...)
getDefaults(self)	Returns the default parameters
getName(self)	Returns the name
getParameters(self)	Returns the parameters
getSubsections(self)
pickTransitionGroup	Overload:
remove_overlapping_features(self, ...)
setName(self, in_0)	Sets the name
setParameters(self, param)	Sets the parameters

createMRMFeature(self, transition_group: LightMRMTransitionGroupCP, picked_chroms: List[MSChromatogram], smoothed_chroms: List[MSChromatogram], chr_idx: int, peak_idx: int) → MRMFeature

findLargestPeak(self, picked_chroms: List[MSChromatogram], chr_idx: int, peak_idx: int) → None

findWidestPeakIndices(self, picked_chroms: List[MSChromatogram], chrom_idx: int, point_idx: int) → None

getDefaults(self) → Param

Returns the default parameters

getName(self) → bytes | str | String

Returns the name

getParameters(self) → Param

Returns the parameters

getSubsections(self) → List[bytes]

pickTransitionGroup()

Overload:

pickTransitionGroup(self, transition_group: LightMRMTransitionGroupCP) → None

Overload:

pickTransitionGroup(self, transition_group: MRMTransitionGroupCP) → None

remove_overlapping_features(self, picked_chroms: List[MSChromatogram], best_left: float, best_right: float) → None

setName(self, in_0: bytes | str | String) → None

Sets the name

setParameters(self, param: Param) → None

Sets the parameters