MzXMLFile#
- class pyopenms.MzXMLFile#
Bases:
object
Cython implementation of _MzXMLFile
- Original C++ documentation is available here
– Inherits from [‘ProgressLogger’]
Methods
Overload:
endProgress
(self)Ends the progress display
getLogType
(self)Returns the type of progress log being used
getOptions
(self)Returns the options for loading/storing
load
(self, filename, exp)Loads a MSExperiment from a MzXML file
nextProgress
(self)Increment progress by 1 (according to range begin-end)
setLogType
(self, in_0)Sets the progress log that should be used.
setOptions
(self, in_0)Sets options for loading/storing
setProgress
(self, value)Sets the current progress
startProgress
(self, begin, end, label)store
(self, filename, exp)Stores a MSExperiment in a MzXML file
- endProgress(self) None #
Ends the progress display
- getLogType(self) int #
Returns the type of progress log being used
- getOptions(self) PeakFileOptions #
Returns the options for loading/storing
- load(self, filename: bytes | str | String, exp: MSExperiment) None #
Loads a MSExperiment from a MzXML file
- Parameters:
exp – MSExperiment
- nextProgress(self) None #
Increment progress by 1 (according to range begin-end)
- setLogType(self, in_0: int) None #
Sets the progress log that should be used. The default type is NONE!
- setOptions(self, in_0: PeakFileOptions) None #
Sets options for loading/storing
- setProgress(self, value: int) None #
Sets the current progress
- store(self, filename: bytes | str | String, exp: MSExperiment) None #
Stores a MSExperiment in a MzXML file
- Parameters:
exp – MSExperiment
- transform()#