RNaseDB

class pyopenms.RNaseDB

Bases: object

Database of enzymes that digest RNA (RNases). This is a singleton class. The enzymes are read from share/CHEMISTRY/Enzymes_RNA.xml.

__init__(*args, **kwargs)

Methods

__init__(*args, **kwargs)
getAllNames()	Get all enzyme names
getEnzyme(name)	Get the enzyme with the given name
getEnzymeByRegEx(cleavage_regex)	Get the enzyme with the given cleavage regex
getInstance()	Returns the singleton instance
hasEnzyme(name)	Check if an enzyme with the given name exists

getAllNames() → list

Get all enzyme names

getEnzyme(name: str) → pyopenms.DigestionEnzymeRNA

Get the enzyme with the given name

getEnzymeByRegEx(cleavage_regex: str) → pyopenms.DigestionEnzymeRNA

Get the enzyme with the given cleavage regex

static getInstance() → pyopenms.RNaseDB

Returns the singleton instance

hasEnzyme(name: str) → bool

Check if an enzyme with the given name exists