SiriusFragmentAnnotation

class pyopenms.SiriusFragmentAnnotation

Bases: object

Cython implementation of _SiriusFragmentAnnotation

Original C++ documentation is available here

__init__()

Overload:

__init__(self) → None

Overload:

__init__(self, in_0: SiriusFragmentAnnotation) → None

Methods

__init__	Overload:
extractAndResolveSiriusAnnotations(self, ...)
extractAnnotationsFromSiriusFile(self, ...)
extractSiriusAnnotationsTgtOnly(self, ...)

extractAndResolveSiriusAnnotations(self, sirius_workspace_subdirs: List[bytes], score_threshold: float, use_exact_mass: bool) → List[SiriusFragmentAnnotation_SiriusTargetDecoySpectra]

extractAnnotationsFromSiriusFile(self, path_to_sirius_workspace: String, max_rank: int, decoy: bool, use_exact_mass: bool) → List[MSSpectrum]

extractSiriusAnnotationsTgtOnly(self, sirius_workspace_subdirs: List[bytes], score_threshold: float, use_exact_mass: bool, resolve: bool) → List[MSSpectrum]