SqMassFile#
- class pyopenms.SqMassFile#
Bases:
object
Cython implementation of _SqMassFile
Original C++ documentation is available here
An class that uses on-disk SQLite database to read and write spectra and chromatograms
This class provides functions to read and write spectra and chromatograms to disk using a SQLite database and store them in sqMass format. This allows users to access, select and filter spectra and chromatograms on-demand even in a large collection of data
- __init__()#
Overload:
- __init__(self) None
Overload:
- __init__(self, in_0: SqMassFile) None
Methods
Overload:
load
(self, filename, map_)Read / Write a complete mass spectrometric experiment
setConfig
(self, config)store
(self, filename, map_)Store an MSExperiment in sqMass format
- load(self, filename: bytes | str | String, map_: MSExperiment) None #
Read / Write a complete mass spectrometric experiment
- setConfig(self, config: SqMassConfig) None #
- store(self, filename: bytes | str | String, map_: MSExperiment) None #
Store an MSExperiment in sqMass format