IsobaricQuantitationMethod#

class pyopenms.IsobaricQuantitationMethod#

Bases: DefaultParamHandler

Abstract base class describing an isobaric quantitation method in terms of the reporter ion channels used and an isotope correction matrix. Isobaric labeling methods like TMT and iTRAQ use reporter ions for multiplexed quantitation of peptides/proteins across multiple samples DefaultParamHandler

__init__(*args, **kwargs)#

Methods

__init__(*args, **kwargs)

Attributes

`getChannelInformation`	Returns information on the different channels used by this quantitation method
`getDefaults`	Returns the default parameters
`getIsotopeCorrectionMatrix`	Get the isotope correction matrix
`getName`	Returns the name
`getNumberOfChannels`	Returns the number of channels available for this quantitation method
`getParameters`	Returns the parameters
`getReferenceChannel`	Returns the index of the reference channel used for ratio calculation
`getSubsections`
`setName`	Sets the name
`setParameters`	Sets the parameters

getChannelInformation#: Returns information on the different channels used by this quantitation method

getDefaults#: Returns the default parameters

getIsotopeCorrectionMatrix#: Get the isotope correction matrix

getName#: Returns the name

getNumberOfChannels#: Returns the number of channels available for this quantitation method

getParameters#: Returns the parameters

getReferenceChannel#: Returns the index of the reference channel used for ratio calculation

getSubsections#

setName#: Sets the name

setParameters#: Sets the parameters