PercolatorOutfile#
- class pyopenms.PercolatorOutfile#
Bases:
object
Cython implementation of _PercolatorOutfile
Original C++ documentation is available here
Class for reading Percolator tab-delimited output files
For PSM-level output, the file extension should be “.psms”
- __init__()#
Overload:
- __init__(self) None
Overload:
- __init__(self, in_0: PercolatorOutfile) None
Methods
Overload:
getScoreType
(self, score_type_name)Returns a score type given its name
load
(self, filename, proteins, peptides, ...)Loads a Percolator output file
- PercolatorOutfile_ScoreType#
alias of
__PercolatorOutfile_ScoreType
- load(self, filename: bytes | str | String, proteins: ProteinIdentification, peptides: List[PeptideIdentification], lookup: SpectrumMetaDataLookup, output_score: int) None #
Loads a Percolator output file