MSPFile#

class pyopenms.MSPFile#

Bases: object

Cython implementation of _MSPFile

Original C++ documentation is available here

__init__()#

Overload:

__init__(self) None

File adapter for MSP files (NIST spectra library)

Overload:

__init__(self, in_0: MSPFile) None

Methods

__init__

Overload:

load(self, filename, ids, exp)

Loads a map from a MSPFile file

store(self, filename, exp)

Stores a map in a MSPFile file

load(self, filename: bytes | str | String, ids: List[PeptideIdentification], exp: MSExperiment) None#

Loads a map from a MSPFile file

Parameters:
  • exp – PeakMap which contains the spectra after reading

  • filename – The filename of the experiment

  • ids – Output parameter which contains the peptide identifications from the spectra annotations

store(self, filename: bytes | str | String, exp: MSExperiment) None#

Stores a map in a MSPFile file