TargetedSpectraExtractor#
- class pyopenms.TargetedSpectraExtractor#
Bases:
object
Cython implementation of _TargetedSpectraExtractor
- Original C++ documentation is available here
– Inherits from [‘DefaultParamHandler’]
- __init__()#
Overload:
- __init__(self) None
Overload:
- __init__(self, in_0: TargetedSpectraExtractor) None
Methods
Overload:
Overload:
constructTransitionsList
(self, in_0, in_1, in_2)Overload:
getDefaultParameters
(self, in_0)getDefaults
(self)Returns the default parameters
getName
(self)Returns the name
getParameters
(self)Returns the parameters
getSubsections
(self)mergeFeatures
(self, in_0, in_1)pickSpectrum
(self, in_0, in_1)Overload:
searchSpectrum
(self, in_0, in_1, in_2)Overload:
setName
(self, in_0)Sets the name
setParameters
(self, param)Sets the parameters
storeSpectraMSP
(self, in_0, in_1)- annotateSpectra()#
Overload:
- annotateSpectra(self, in_0: List[MSSpectrum], in_1: TargetedExperiment, in_2: List[MSSpectrum], in_3: FeatureMap) None
Overload:
- annotateSpectra(self, in_0: List[MSSpectrum], in_1: TargetedExperiment, in_2: List[MSSpectrum]) None
Overload:
- annotateSpectra(self, in_0: List[MSSpectrum], in_1: FeatureMap, in_2: FeatureMap, in_3: List[MSSpectrum]) None
- constructTransitionsList(self, in_0: FeatureMap, in_1: FeatureMap, in_2: TargetedExperiment) None #
- extractSpectra()#
Overload:
- extractSpectra(self, in_0: MSExperiment, in_1: TargetedExperiment, in_2: List[MSSpectrum], in_3: FeatureMap, in_4: bool) None
Overload:
- extractSpectra(self, in_0: MSExperiment, in_1: TargetedExperiment, in_2: List[MSSpectrum]) None
Overload:
- extractSpectra(self, in_0: MSExperiment, in_1: FeatureMap, in_2: List[MSSpectrum]) None
- getSubsections(self) List[bytes] #
- mergeFeatures(self, in_0: FeatureMap, in_1: FeatureMap) None #
- pickSpectrum(self, in_0: MSSpectrum, in_1: MSSpectrum) None #
- scoreSpectra()#
Overload:
- scoreSpectra(self, in_0: List[MSSpectrum], in_1: List[MSSpectrum], in_2: FeatureMap, in_3: List[MSSpectrum]) None
Overload:
- scoreSpectra(self, in_0: List[MSSpectrum], in_1: List[MSSpectrum], in_2: List[MSSpectrum]) None
- searchSpectrum(self, in_0: FeatureMap, in_1: FeatureMap, in_2: bool) None #
- selectSpectra()#
Overload:
- selectSpectra(self, in_0: List[MSSpectrum], in_1: FeatureMap, in_2: List[MSSpectrum], in_3: FeatureMap) None
Overload:
- selectSpectra(self, in_0: List[MSSpectrum], in_1: List[MSSpectrum]) None
- storeSpectraMSP(self, in_0: bytes | str | String, in_1: MSExperiment) None #