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Section Navigation

  • pyopenms
    • AAIndex
    • AASeqWithMass
    • AASequence
    • AMSE_AdductInfo
    • AQS_featureConcentration
    • AQS_runConcentration
    • AScore
    • AbsoluteQuantitation
    • AbsoluteQuantitationMethod
    • AbsoluteQuantitationMethodFile
    • AbsoluteQuantitationStandards
    • AbsoluteQuantitationStandardsFile
    • AccurateMassSearchEngine
    • AccurateMassSearchResult
    • Acquisition
    • AcquisitionInfo
    • ActivationMethod
    • Adduct
    • AggregationMethod
    • AnnotationState
    • AnnotationStatistics
    • ArrayWrapperDouble
    • ArrayWrapperFloat
    • Attachment
    • AverageLinkage
    • BSpline2d
    • Base64
    • BaseFeature
    • BasicProteinInferenceAlgorithm
    • BayesianProteinInferenceAlgorithm
    • BiGaussFitter1D
    • BiGaussModel
    • BilinearInterpolation
    • BinnedSpectrum
    • BoundaryCondition
    • CV
    • CVMappingFile
    • CVMappingRule
    • CVMappingTerm
    • CVMappings
    • CVReference
    • CVTerm
    • CVTermList
    • CVTermListInterface
    • CVTerm_ControlledVocabulary
    • CachedMzMLHandler
    • CachedSwathFileConsumer
    • CachedmzML
    • CalibrationData
    • ChannelInfo
    • ChargePair
    • ChargedIndexSet
    • ChecksumType
    • ChromatogramExtractor
    • ChromatogramExtractorAlgorithm
    • ChromatogramPeak
    • ChromatogramSettings
    • ChromatogramTools
    • ChromeleonFile
    • ClusterProxyKD
    • ClusteringGrid
    • CoarseIsotopePatternGenerator
    • ColumnHeader
    • Compomer
    • Compound
    • ConfidenceScoring
    • Configuration
    • ConsensusFeature
    • ConsensusIDAlgorithm
    • ConsensusIDAlgorithmAverage
    • ConsensusIDAlgorithmBest
    • ConsensusIDAlgorithmIdentity
    • ConsensusIDAlgorithmPEPIons
    • ConsensusIDAlgorithmPEPMatrix
    • ConsensusIDAlgorithmRanks
    • ConsensusIDAlgorithmSimilarity
    • ConsensusIDAlgorithmWorst
    • ConsensusMap
    • ConsensusMapNormalizerAlgorithmMedian
    • ConsensusMapNormalizerAlgorithmQuantile
    • ConsensusMapNormalizerAlgorithmThreshold
    • ConsensusXMLFile
    • Contact
    • ContactPerson
    • ControlledVocabulary
    • ConvexHull2D
    • CrossLinkSpectrumMatch
    • CrossLinksDB
    • CsvFile
    • CubicSpline2d
    • DBoundingBox2
    • DIAScoring
    • DPosition1
    • DPosition2
    • DRange1
    • DRange2
    • DRangeIntersection
    • DTA2DFile
    • DTAFile
    • DataFilter
    • DataFilters
    • DataProcessing
    • DataType
    • DataValue
    • Date
    • DateTime
    • DecoyGenerator
    • DecoyTransitionType
    • Deisotoper
    • Digestion
    • DigestionEnzyme
    • DigestionEnzymeProtein
    • DigestionEnzymeRNA
    • DimensionDescription
    • DistanceMatrix
    • DocumentIdentifier
    • DriftTimeUnit
    • EDTAFile
    • Element
    • ElementDB
    • ElutionModelFitter
    • ElutionPeakDetection
    • EmgFitter1D
    • EmgGradientDescent
    • EmgModel
    • EmgScoring
    • EmpiricalFormula
    • EnzymaticDigestion
    • ExperimentalDesign
    • ExperimentalDesignFile
    • ExperimentalDesign_MSFileSectionEntry
    • ExperimentalDesign_SampleSection
    • ExperimentalSettings
    • ExtractionCoordinates
    • FASTAEntry
    • FASTAFile
    • FIAMSDataProcessor
    • FIAMSScheduler
    • FalseDiscoveryRate
    • Feature
    • FeatureDeconvolution
    • FeatureDistance
    • FeatureFileOptions
    • FeatureFinderAlgorithmMetaboIdent
    • FeatureFinderAlgorithmPicked
    • FeatureFinderIdentificationAlgorithm
    • FeatureFinderMetaboIdentCompound
    • FeatureFinderMultiplexAlgorithm
    • FeatureFindingMetabo
    • FeatureGroupingAlgorithm
    • FeatureGroupingAlgorithmKD
    • FeatureGroupingAlgorithmLabeled
    • FeatureGroupingAlgorithmQT
    • FeatureGroupingAlgorithmUnlabeled
    • FeatureHandle
    • FeatureMap
    • FeatureMapping
    • FeatureMapping_FeatureMappingInfo
    • FeatureMapping_FeatureToMs2Indices
    • FeatureXMLFile
    • File
    • FileHandler
    • FileType
    • FileTypes
    • FineIsotopePatternGenerator
    • Fitter1D
    • FloatDataArray
    • GNPSMGFFile
    • GNPSMetaValueFile
    • GNPSQuantificationFile
    • GaussFilter
    • GaussFitResult
    • GaussFitter
    • GaussTraceFitter
    • Gradient
    • GridBasedCluster
    • HPLC
    • HyperScore
    • IBSpectraFile
    • IDConflictResolverAlgorithm
    • IDDecoyProbability
    • IDFilter
    • IDMapper
    • IDMapper_SpectraIdentificationState
    • IDRipper
    • ILPDCWrapper
    • IMFormat
    • IMSAlphabet
    • IMSElement
    • IMSIsotopeDistribution
    • IMSIsotopeDistribution_Peak
    • IMSWeights
    • IMTypes
    • ITRAQ_TYPES
    • IdXMLFile
    • IdentificationRuns
    • IncludeExcludeTarget
    • IndexedMzMLDecoder
    • IndexedMzMLFileLoader
    • IndexedMzMLHandler
    • InspectInfile
    • InspectOutfile
    • Instrument
    • InstrumentSettings
    • IntegerDataArray
    • Interfaces
    • InternalCalibration
    • InternalCalibration_LockMass
    • Internal_MzMLValidator
    • InterpolationModel
    • IonDetector
    • IonIdentityMolecularNetworking
    • IonOpticsType
    • IonSource
    • IsobaricChannelExtractor
    • IsobaricChannelInformation
    • IsobaricIsotopeCorrector
    • IsobaricNormalizer
    • IsobaricQuantifier
    • IsobaricQuantifierStatistics
    • IsotopeCluster
    • IsotopeDistribution
    • IsotopeFitter1D
    • IsotopeLabelingMDVs
    • IsotopeModel
    • IsotopePattern
    • IsotopeVariant
    • ItraqConstants
    • ItraqEightPlexQuantitationMethod
    • ItraqFourPlexQuantitationMethod
    • JavaInfo
    • KDTreeFeatureMaps
    • KDTreeFeatureNode
    • Kernel_MassTrace
    • KroenikFile
    • LPWrapper
    • LabeledPairFinder
    • LightCompound
    • LightMRMTransitionGroupCP
    • LightModification
    • LightProtein
    • LightTargetedExperiment
    • LightTransition
    • LinearInterpolation
    • LinearResampler
    • LinearResamplerAlign
    • LogConfigHandler
    • LogType
    • LowessSmoothing
    • MRMAssay
    • MRMDecoy
    • MRMFP_ComponentGroupParams
    • MRMFP_ComponentParams
    • MRMFQC_ComponentGroupPairQCs
    • MRMFQC_ComponentGroupQCs
    • MRMFQC_ComponentQCs
    • MRMFeature
    • MRMFeatureFilter
    • MRMFeatureFinderScoring
    • MRMFeaturePicker
    • MRMFeaturePickerFile
    • MRMFeatureQC
    • MRMFeatureQCFile
    • MRMIonSeries
    • MRMMapping
    • MRMRTNormalizer
    • MRMScoring
    • MRMTransitionGroupCP
    • MRMTransitionGroupPicker
    • MS2File
    • MSChromatogram
    • MSDataAggregatingConsumer
    • MSDataCachedConsumer
    • MSDataSqlConsumer
    • MSDataStoringConsumer
    • MSExperiment
    • MSNumpressCoder
    • MSPFile
    • MSPGenericFile
    • MSSpectrum
    • MSstatsFile
    • MT_QUANTMETHOD
    • MZTrafoModel
    • MZTrafoModel_MODELTYPE
    • MapAlignmentAlgorithmIdentification
    • MapAlignmentAlgorithmKD
    • MapAlignmentAlgorithmPoseClustering
    • MapAlignmentEvaluationAlgorithmPrecision
    • MapAlignmentEvaluationAlgorithmRecall
    • MapAlignmentTransformer
    • MapConversion
    • MascotGenericFile
    • MascotInfile
    • MascotXMLFile
    • MassAnalyzer
    • MassDecomposition
    • MassDecompositionAlgorithm
    • MassExplainer
    • MassTrace
    • MassTraceDetection
    • MassTraces
    • MasstraceCorrelator
    • MatrixDouble
    • Measure
    • MetaInfo
    • MetaInfoDescription
    • MetaInfoInterface
    • MetaInfoRegistry
    • MetaboTargetedAssay
    • MetaboTargetedAssay_CompoundTargetDecoyPair
    • MetaboTargetedTargetDecoy
    • MetaboTargetedTargetDecoy_MetaboTargetDecoyMassMapping
    • MetaboliteFeatureDeconvolution
    • MetaboliteSpectralMatching
    • Modification
    • ModificationDefinition
    • ModificationDefinitionsSet
    • ModificationsDB
    • ModifiedPeptideGenerator
    • ModifiedPeptideGenerator_MapToResidueType
    • MorpheusScore
    • MorpheusScore_Result
    • MorphologicalFilter
    • MsInspectFile
    • MultiplexDeltaMasses
    • MultiplexDeltaMassesGenerator
    • MultiplexDeltaMassesGenerator_Label
    • MultiplexDeltaMasses_DeltaMass
    • MultiplexIsotopicPeakPattern
    • MzDataFile
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    • MzMLFile
    • MzMLSpectrumDecoder
    • MzMLSqliteHandler
    • MzMLSwathFileConsumer
    • MzQCFile
    • MzTab
    • MzTabFile
    • MzTabM
    • MzTabMFile
    • MzXMLFile
    • NASequence
    • NLargest
    • NoiseEstimator
    • NonNegativeLeastSquaresSolver
    • NoopMSDataWritingConsumer
    • NormalizationMethod
    • Normalizer
    • NucleicAcidSpectrumGenerator
    • NumpressConfig
    • OMSSACSVFile
    • OMSSAXMLFile
    • OPXLDataStructs
    • OPXLHelper
    • OPXLSpectrumProcessingAlgorithms
    • OPXL_PreprocessedPairSpectra
    • OSBinaryDataArray
    • OSChromatogram
    • OSChromatogramMeta
    • OSSpectrum
    • OSSpectrumMeta
    • OSWFile
    • OSW_ChromExtractParams
    • OnDiscMSExperiment
    • OpenMSBuildInfo
    • OpenMSOSInfo
    • OpenPepXLAlgorithm
    • OpenPepXLLFAlgorithm
    • OpenSwathDataAccessHelper
    • OpenSwathHelper
    • OpenSwathOSWWriter
    • OpenSwathScoring
    • OpenSwath_Scores
    • OpenSwath_Scores_Usage
    • OriginAnnotationFormat
    • PI_PeakArea
    • PI_PeakBackground
    • PI_PeakShapeMetrics
    • PScore
    • Param
    • ParamCTDFile
    • ParamEntry
    • ParamNode
    • ParamValue
    • ParamXMLFile
    • Peak1D
    • Peak2D
    • PeakBoundary
    • PeakFileOptions
    • PeakIndex
    • PeakIntegrator
    • PeakMap
    • PeakPickerChromatogram
    • PeakPickerHiRes
    • PeakPickerIterative
    • PeakSpectrum
    • PeakTypeEstimator
    • PeakWidthEstimator
    • PepXMLFile
    • PepXMLFileMascot
    • Peptide
    • PeptideAndProteinQuant
    • PeptideAndProteinQuant_PeptideData
    • PeptideAndProteinQuant_ProteinData
    • PeptideAndProteinQuant_Statistics
    • PeptideEvidence
    • PeptideHit
    • PeptideHit_AnalysisResult
    • PeptideHit_PeakAnnotation
    • PeptideIdentification
    • PeptideIndexing
    • PeptideProteinResolution
    • PeptideProteinResolution_ConnectedComponent
    • PercolatorFeatureSetHelper
    • PercolatorInfile
    • PercolatorOutfile
    • PlainMSDataWritingConsumer
    • PosteriorErrorProbabilityModel
    • Precursor
    • PrecursorCorrection
    • PrecursorPurity
    • Prediction
    • ProbablePhosphoSites
    • Product
    • ProgressLogger
    • ProtXMLFile
    • ProteaseDB
    • ProteaseDigestion
    • Protein
    • ProteinGroup
    • ProteinHit
    • ProteinIdentification
    • ProteinInference
    • ProteinProteinCrossLink
    • Publication
    • PurityScores
    • QTCluster
    • QTClusterFinder
    • QcMLFile
    • QualityParameter
    • QuotingMethod
    • RANSAC
    • RANSACParam
    • RANSACQuadratic
    • RNaseDB
    • RNaseDigestion
    • RangeIntensity
    • RangeMZ
    • RangeMobility
    • RangeRT
    • RankScaler
    • RansacModelLinear
    • RansacModelQuadratic
    • Ratio
    • ReactionMonitoringTransition
    • RealMassDecomposer
    • RegularSwathFileConsumer
    • Residue
    • ResidueDB
    • ResidueModification
    • RetentionTime
    • Ribonucleotide
    • RibonucleotideDB
    • RichPeak2D
    • RipFileContent
    • RipFileIdentifier
    • SIDE
    • Sample
    • SavitzkyGolayFilter
    • ScanMode
    • ScanWindow
    • SearchParameters
    • Seed
    • SeedListGenerator
    • SemanticValidator
    • SemanticValidator_CVTerm
    • SequestInfile
    • SequestOutfile
    • SignalToNoiseEstimatorMeanIterative
    • SignalToNoiseEstimatorMedian
    • SignalToNoiseEstimatorMedianChrom
    • SignalToNoiseEstimatorMedianRapid
    • SimpleOpenMSSpectraFactory
    • SimplePeak
    • SimpleSearchEngineAlgorithm
    • SimpleTSGXLMS
    • SiriusExportAlgorithm
    • SiriusFragmentAnnotation
    • SiriusFragmentAnnotation_SiriusTargetDecoySpectra
    • SiriusMSFile
    • SiriusMSFile_AccessionInfo
    • SiriusMSFile_CompoundInfo
    • Software
    • SolverParam
    • SourceFile
    • SpectraMerger
    • SpectraSTSimilarityScore
    • SpectralMatch
    • SpectrumAccessOpenMS
    • SpectrumAccessOpenMSCached
    • SpectrumAccessOpenMSInMemory
    • SpectrumAccessQuadMZTransforming
    • SpectrumAccessSqMass
    • SpectrumAccessTransforming
    • SpectrumAlignment
    • SpectrumAlignmentScore
    • SpectrumAnnotator
    • SpectrumHelper
    • SpectrumLookup
    • SpectrumMetaData
    • SpectrumMetaDataLookup
    • SpectrumSettings
    • SplineInterpolatedPeaks
    • SplinePackage
    • SplineSpectrum_Navigator
    • SqMassConfig
    • SqMassFile
    • SqrtScaler
    • StablePairFinder
    • String
    • StringDataArray
    • StringView
    • SwathFile
    • SwathMap
    • SwathMapMassCorrection
    • SwathWindowLoader
    • SysInfo
    • TMTEighteenPlexQuantitationMethod
    • TMTElevenPlexQuantitationMethod
    • TMTSixPlexQuantitationMethod
    • TMTSixteenPlexQuantitationMethod
    • TMTTenPlexQuantitationMethod
    • TM_DataPoint
    • TSE_Match
    • Tagger
    • Tagging
    • TargetedExperiment
    • TargetedExperiment_Instrument
    • TargetedExperiment_Interpretation
    • TargetedExperiment_Modification
    • TargetedSpectraExtractor
    • TermSpecificityNuc
    • TextFile
    • TheoreticalIsotopePattern
    • TheoreticalSpectrumGenerator
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    • ThresholdMower
    • ToolInfo
    • TraMLFile
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    • TraceInfo
    • TransformationDescription
    • TransformationModelBSpline
    • TransformationModelInterpolated
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    • TransformationXMLFile
    • TransitionPQPFile
    • TransitionTSVFile
    • UnimodXMLFile
    • UniqueIdGenerator
    • Unit
    • UnitType
    • ValueType
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    • streampos
  • pyopenms.Constants
  • pyopenms.plotting
  • API docs
  • pyopenms
  • UnitType

UnitType#

class pyopenms.UnitType#

Bases: object

__init__()#

Methods

__init__()

getMapping

Attributes

MS_ONTOLOGY

OTHER

UNIT_ONTOLOGY

MS_ONTOLOGY = 1#
OTHER = 2#
UNIT_ONTOLOGY = 0#
getMapping()#

previous

Unit

next

ValueType

On this page
  • UnitType
    • UnitType.__init__()
    • UnitType.MS_ONTOLOGY
    • UnitType.OTHER
    • UnitType.UNIT_ONTOLOGY
    • UnitType.getMapping()
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