IncludeExcludeTarget

class pyopenms.IncludeExcludeTarget

Bases: object

Cython implementation of _IncludeExcludeTarget

Original C++ documentation is available here

__init__()

Overload:

__init__(self) → None

This class stores a SRM/MRM transition

Overload:

__init__(self, in_0: IncludeExcludeTarget) → None

Methods

__init__	Overload:
addCVTerm(self, term)
addConfiguration(self, configuration)
addInterpretation(self, interpretation)
addPrecursorCVTerm(self, cv_term)
addPredictionTerm(self, prediction)
addProductCVTerm(self, cv_term)
empty(self)
getCVTerms(self)
getCompoundRef(self)
getConfigurations(self)
getInterpretations(self)
getName(self)
getPeptideRef(self)
getPrecursorCVTermList(self)
getPrecursorMZ(self)
getPrediction(self)
getProductCVTermList(self)
getProductMZ(self)
getRetentionTime(self)
hasCVTerm(self, accession)
replaceCVTerm(self, term)
replaceCVTerms	Overload:
setCVTerms(self, terms)
setCompoundRef(self, compound_ref)
setConfigurations(self, configuration)
setInterpretations(self, interpretations)
setName(self, name)
setPeptideRef(self, peptide_ref)
setPrecursorCVTermList(self, list_)
setPrecursorMZ(self, mz)
setPrediction(self, prediction)
setProductCVTermList(self, list_)
setProductMZ(self, mz)
setRetentionTime(self, rt)

addCVTerm(self, term: CVTerm) → None

addConfiguration(self, configuration: Configuration) → None

addInterpretation(self, interpretation: CVTermList) → None

addPrecursorCVTerm(self, cv_term: CVTerm) → None

addPredictionTerm(self, prediction: CVTerm) → None

addProductCVTerm(self, cv_term: CVTerm) → None

empty(self) → bool

getCVTerms(self) → Dict[bytes, List[CVTerm]]

getCompoundRef(self) → bytes | str | String

getConfigurations(self) → List[Configuration]

getInterpretations(self) → List[CVTermList]

getName(self) → bytes | str | String

getPeptideRef(self) → bytes | str | String

getPrecursorCVTermList(self) → CVTermList

getPrecursorMZ(self) → float

getPrediction(self) → CVTermList

getProductCVTermList(self) → CVTermList

getProductMZ(self) → float

getRetentionTime(self) → RetentionTime

hasCVTerm(self, accession: bytes | str | String) → bool

replaceCVTerm(self, term: CVTerm) → None

replaceCVTerms()

Overload:

replaceCVTerms(self, cv_terms: List[CVTerm], accession: bytes | str | String) → None

Overload:

replaceCVTerms(self, cv_term_map: Dict[bytes, List[CVTerm]]) → None

setCVTerms(self, terms: List[CVTerm]) → None

setCompoundRef(self, compound_ref: bytes | str | String) → None

setConfigurations(self, configuration: List[Configuration]) → None

setInterpretations(self, interpretations: List[CVTermList]) → None

setName(self, name: bytes | str | String) → None

setPeptideRef(self, peptide_ref: bytes | str | String) → None

setPrecursorCVTermList(self, list_: CVTermList) → None

setPrecursorMZ(self, mz: float) → None

setPrediction(self, prediction: CVTermList) → None

setProductCVTermList(self, list_: CVTermList) → None

setProductMZ(self, mz: float) → None

setRetentionTime(self, rt: RetentionTime) → None