- class pyopenms.GNPSQuantificationFile#
Cython implementation of _GNPSQuantificationFile
Original C++ documentation is available here
- __init__(self) None
- __init__(self, in_0: GNPSQuantificationFile) None
store(self, consensus_map, output_file)
Write feature quantification table (txt file) from a ConsensusMap.
- store(self, consensus_map: ConsensusMap, output_file: bytes | str | String) None #
Write feature quantification table (txt file) from a ConsensusMap. Required for GNPS FBMN.
The table contains map information on the featureXML files from which the ConsensusMap was generated as well as a row for every consensus feature with information on rt, mz, intensity, width and quality. The same information is added for each original feature in the consensus feature.
consensus_map – Input ConsensusMap annotated with IonIdentityMolecularNetworking.annotateConsensusMap.
output_file – Output file path for the feature quantification table.