MRMRTNormalizer#
- class pyopenms.MRMRTNormalizer#
Bases:
object
Cython implementation of _MRMRTNormalizer
Original C++ documentation is available here
- __init__()#
Methods
__init__
()__static_MRMRTNormalizer_chauvenet(residuals: List[float] , pos: int ) -> bool
__static_MRMRTNormalizer_chauvenet_probability(residuals: List[float] , pos: int ) -> float
__static_MRMRTNormalizer_computeBinnedCoverage(rtRange: List[float, float] , pairs: List[List[float, float]] , nrBins: int , minPeptidesPerBin: int , minBinsFilled: int ) -> bool
__static_MRMRTNormalizer_removeOutliersIterative(pairs: List[List[float, float]] , rsq_limit: float , coverage_limit: float , use_chauvenet: bool , outlier_detection_method: bytes ) -> List[List[float, float]]
__static_MRMRTNormalizer_removeOutliersRANSAC(pairs: List[List[float, float]] , rsq_limit: float , coverage_limit: float , max_iterations: int , max_rt_threshold: float , sampling_size: int ) -> List[List[float, float]]
- chauvenet()#
__static_MRMRTNormalizer_chauvenet(residuals: List[float] , pos: int ) -> bool
- chauvenet_probability()#
__static_MRMRTNormalizer_chauvenet_probability(residuals: List[float] , pos: int ) -> float
- computeBinnedCoverage()#
__static_MRMRTNormalizer_computeBinnedCoverage(rtRange: List[float, float] , pairs: List[List[float, float]] , nrBins: int , minPeptidesPerBin: int , minBinsFilled: int ) -> bool
- removeOutliersIterative()#
__static_MRMRTNormalizer_removeOutliersIterative(pairs: List[List[float, float]] , rsq_limit: float , coverage_limit: float , use_chauvenet: bool , outlier_detection_method: bytes ) -> List[List[float, float]]
- removeOutliersRANSAC()#
__static_MRMRTNormalizer_removeOutliersRANSAC(pairs: List[List[float, float]] , rsq_limit: float , coverage_limit: float , max_iterations: int , max_rt_threshold: float , sampling_size: int ) -> List[List[float, float]]