Biosaur2Algorithm#

class pyopenms.Biosaur2Algorithm#

Bases: object

Cython implementation of _Biosaur2Algorithm

Original C++ documentation is available here

C++ implementation of the Biosaur2 feature detection workflow.

__init__()#

Overload:

__init__(self) → None

Instantiate the Biosaur2 feature finding algorithm

Overload:

__init__(self, in_0: Biosaur2Algorithm) → None

Copy constructor

Methods

__init__

getMSData

run(self, feature_map)

Run the algorithm storing only the resulting features

setMSData(self, ms_data)

Set the MS data used for feature detection (copy version)
getMSData()#

Overload:

getMSData(self) → MSExperiment

Get non-const reference to MS data

Overload:

getMSData(self) → MSExperiment

Get const reference to MS data

run(self, feature_map: FeatureMap) → None#

Run the algorithm storing only the resulting features

setMSData(self, ms_data: MSExperiment) → None#

Set the MS data used for feature detection (copy version)