PeptideIndexing#
- class pyopenms.PeptideIndexing#
Bases:
object
Cython implementation of _PeptideIndexing
- Original C++ documentation is available here
– Inherits from [‘DefaultParamHandler’]
- __init__()#
Overload:
- __init__(self) None
Overload:
- __init__(self, in_0: PeptideIndexing) None
Methods
Overload:
getDecoyString
(self)getDefaults
(self)Returns the default parameters
getName
(self)Returns the name
getParameters
(self)Returns the parameters
getSubsections
(self)isPrefix
(self)run
(self, proteins, prot_ids, pep_ids)setName
(self, in_0)Sets the name
setParameters
(self, param)Sets the parameters
- PeptideIndexing_ExitCodes#
alias of
__PeptideIndexing_ExitCodes
- getSubsections(self) List[bytes] #
- isPrefix(self) bool #
- run(self, proteins: List[FASTAEntry], prot_ids: List[ProteinIdentification], pep_ids: List[PeptideIdentification]) int #