TransitionPQPFile#
- class pyopenms.TransitionPQPFile#
Bases:
object
Cython implementation of _TransitionPQPFile
Original C++ documentation is available here
- __init__()#
Overload:
- __init__(self) None
Overload:
- __init__(self, in_0: TransitionPQPFile) None
Methods
Overload:
Overload:
Overload:
convertTargetedExperimentToPQP
(self, ...)Write out a targeted experiment (TraML structure) into a PQP file
convertTargetedExperimentToTSV
(self, ...)validateTargetedExperiment
(self, targeted_exp)- convertPQPToTargetedExperiment()#
Overload:
- convertPQPToTargetedExperiment(self, filename: bytes, targeted_exp: TargetedExperiment, legacy_traml_id: bool) None
Read in a PQP file and construct a targeted experiment (TraML structure)
- Parameters:
filename – The input file
targeted_exp – The output targeted experiment
legacy_traml_id – Should legacy TraML IDs be used (boolean)?
Overload:
- convertPQPToTargetedExperiment(self, filename: bytes, targeted_exp: LightTargetedExperiment, legacy_traml_id: bool) None
Read in a PQP file and construct a targeted experiment (Light transition structure)
- Parameters:
filename – The input file
targeted_exp – The output targeted experiment
legacy_traml_id – Should legacy TraML IDs be used (boolean)?
- convertTSVToTargetedExperiment()#
Overload:
- convertTSVToTargetedExperiment(self, filename: bytes, filetype: int, targeted_exp: TargetedExperiment) None
Overload:
- convertTSVToTargetedExperiment(self, filename: bytes, filetype: int, targeted_exp: LightTargetedExperiment) None
- convertTargetedExperimentToPQP(self, filename: bytes, targeted_exp: TargetedExperiment) None #
Write out a targeted experiment (TraML structure) into a PQP file
- Parameters:
filename – The output file
targeted_exp – The targeted experiment
- convertTargetedExperimentToTSV(self, filename: bytes, targeted_exp: TargetedExperiment) None #
- validateTargetedExperiment(self, targeted_exp: TargetedExperiment) None #