pyopenms.peptide_identifications_to_df

pyopenms.peptide_identifications_to_df(peps: PeptideIdentificationList, decode_ontology: bool = True, default_missing_values: dict = None, export_unidentified: bool = True)

Converts a list of peptide identifications to a pandas DataFrame. Parameters: peps (PeptideIdentificationList): list of PeptideIdentification objects decode_ontology (bool): decode meta value names default_missing_values: default value for missing values for each data type export_unidentified: export PeptideIdentifications without PeptideHit Returns: pandas.DataFrame: peptide identifications in a DataFrame